Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927568.1_cds_XP_016475327.1_67269
CDS Infomation

[gene=LOC107797009] [db_xref=GeneID:107797009] [protein=chloroplast sensor kinase, chloroplastic-like] [protein_id=XP_016475327.1] [location=join(4101..4242,4370..4851,7428..7589,7669..7965,8275..8340,8454..8522,8668..8760,9165..9358,9806..10079,10315..10569)] [gbkey=CDS]
Sequence

ATGATAGGGAAGAAAACAGAGGAGGAAGCCACAAACAGAAATAGAGCAAGCGGTGGGAAG
ATGACGATTCCCCAGAAAACAGCGCAGGCGAAAAACAATTTGCTAAGCACGCGTCAAAGT
GGGAAGCAAAAGGGCAGCACGTCGGAATGGCATTGGGCCAATTTCCTCCATGTGTGGACA
TTGAGCCACACAGCATTCGCATTACAATCATCCATCCGATCTCACAGTAACGAAAATGCT
GCTCTCTGCATTTCCTCCGCAGAATCCATTACCATTATCCAATCTCACCCACCCACCNTT
ACTCACGCTTCTTCACAGAGACTACCACCACTTGCTCTCACCAATGCTGTCGCTACCTCC
TCCACCTATACTTCTCTCCGGCACGTCAGTGGCGCGTGCTCCGACGATGATTCTGACGGC
GACGGCGACAGCGACGGTATGGTTTCGTCGGCGTCAGCTGTTGCTGCGGCCATACGGAAT
GCTTCGACGTCACCGGTGGAGTTCGTTCAGAGGATTGAAAAGGATGACGGAGGCTTGGTA
TTACCGAGTGCTGATTTCAAGAGACTTTGCGTTGAACAATTCGACCTCTTTCGCCGTATT
GTCCATCCTCAGTCTGTTCTTTCCGTTTATGTAAGACCAGCAGGTAGTTATGTAATGGAT
CAGCTAGAGTTGCGTCGCATTACTTTACATCCACGTGTTAATGCGACTGATCTTGTGATT
CTAACTGGTAACTTTAGCATTCCTGCGGGCTTAAGAGCGACTGAAGCAGCTCTTTCGAGA
CAAGAGGCAGAATTACTTCCTGAGCTTGGAGCTGTGGTGTTCCCTATGGTAAAACACCCA
TTTATTGTTGGGTTTTTAGTTGCGGAACTCCCAAGAACTGCATTTGATAAGGGTGGGTTT
AATGTGAAAGCATGGCCTGGCCAGGAGGAGTTTTATTCCTTGCCTCCTAGCACGGATTTG
AAATCGTTGAATATCCAAACTTCAACTGACCACTCCTTTGAGATGTTAAAATTCACAGCT
GAGCAAAGATTAAATGCTATAAATATTTCCCGTTCACTTGCAATGGCTTATGTCATGGAT
CAGAAAGCAATTTTGCTCCAACAGTCCACCTGGCAAAATAATATCAGGATGAGCAATTTG
GTTGAGCAAATTCGGGGTTCTCTTTCCAGTATTCGAACTTTGAGTAAGATGTTATCTACT
CAGATTAGAAAGAGTGAGATTTCATATGATATTGTTCAAGACATCTTGGAGCAAGGTGAT
TGCTTGAGTGATACTCTTAAGGGACTCCAGGATGCTGTTTCCCTAACAAAGGCTAATATA
ATGCGCTATAGTGAAGAAACATTGAAAAAGATGCCTAAATCAACTCATCCTGATCGTGAG
TCGGTGAGGTCTCAGTTATCCAGTAGCTTGTCTGAGAAGCTAGAATCTCTCTCTTTAAAA
TCCAAGGATCTAGAAATGCCAATGCCACCTCTTGCTCTAGCACCTTTACGCCAGGAAGGA
ATCAGACCATGCAATGTTTCTGATGTACTGGTGGATTTGGTGGGAGCAGTGGCGCCTTTA
GCACACGAGCAGAGGAGAGCTGTTTTACTTTCTGAGGTTCCGAGATCTTTACAGGTGCCC
ATTGAAGAGCCTGCTTTACGACAGGCATTGGGTAATCTGATTGAGGGTGCTTTATTGCGT
ATACAAGCTGGTGGAAAGGTTGAAATTGTTGCCACTGGAGCACCTGCAGGGGGTGCTCTT
GTTATTATTGATGATGATGGCCTTGATATGCACTATATGACACAGATGCACTCTCTAGCA
CCTTTTGGGGCAGATCTATTTTCTGAAGATAAGGTAGAGGATAACATGACATGGAATTTT
GTGGCTGGACTAACTGTTTCACGAGAAATATTGGAGAGTTATGGATGTGTCGTGCGGGTG
ATCTCACCAAGATTAACAGATGCTGCAATTGGAACTGGGGGAACCCGTATAGAACTCTGG
TTTCCCTCTTTATCTTCTTCATCTGTCGTAAATGGCCCTTCTCATGAGGATTAA

Peptide Sequence

PEP ID

XP_016475327.1
PEP Infomation

PREDICTED: chloroplast sensor kinase, chloroplastic-like [Nicotiana tabacum]
Sequence

MIGKKTEEEATNRNRASGGKMTIPQKTAQAKNNLLSTRQSGKQKGSTSEWHWANFLHVWT
LSHTAFALQSSIRSHSNENAALCISSAESITIIQSHPPTXTHASSQRLPPLALTNAVATS
STYTSLRHVSGACSDDDSDGDGDSDGMVSSASAVAAAIRNASTSPVEFVQRIEKDDGGLV
LPSADFKRLCVEQFDLFRRIVHPQSVLSVYVRPAGSYVMDQLELRRITLHPRVNATDLVI
LTGNFSIPAGLRATEAALSRQEAELLPELGAVVFPMVKHPFIVGFLVAELPRTAFDKGGF
NVKAWPGQEEFYSLPPSTDLKSLNIQTSTDHSFEMLKFTAEQRLNAINISRSLAMAYVMD
QKAILLQQSTWQNNIRMSNLVEQIRGSLSSIRTLSKMLSTQIRKSEISYDIVQDILEQGD
CLSDTLKGLQDAVSLTKANIMRYSEETLKKMPKSTHPDRESVRSQLSSSLSEKLESLSLK
SKDLEMPMPPLALAPLRQEGIRPCNVSDVLVDLVGAVAPLAHEQRRAVLLSEVPRSLQVP
IEEPALRQALGNLIEGALLRIQAGGKVEIVATGAPAGGALVIIDDDGLDMHYMTQMHSLA
PFGADLFSEDKVEDNMTWNFVAGLTVSREILESYGCVVRVISPRLTDAAIGTGGTRIELW
FPSLSSSSVVNGPSHED

Transcript Sequence

Gene sequence data has not been registered.